Biopython entrezlavori

I need the following code to run in Quasar 2.6.0 / Vue 3.0 async fetchAbstracts() { try { const url = ',18340043,19033662,20978265,23204432,23275034,23892238&retmode=xml'; const response = await (url); const xmlData = ; const parser = new ({ explicitArray: false, ignoreAttrs: true }); (xmlData, (err, result) => { if (err) { throw err; } // Navigate to the abstract texts. const articles = || []; (article => { const abstractText = ; // AbstractText can be an array if

I'm using Vue 2.0 and I need to parse an XML file that I pull from a government source. The code needs to be bullet proof with error checking. I'm currently using code like: if (('GrantList')) { GrantList = ('GrantList').querySelectorAll("Grant"); ...government source. The code needs to be bullet proof with error checking. I'm currently using code like: if (('GrantList')) { GrantList = ('GrantList').querySelectorAll("Grant"); } The entire function has been written but I need the code tested and tweaked so it does not produce any errors. ,37579095

I need help building 6 gene trees. I need 6 clean, clear, phylogenetic trees built for all 6 genes. The phylogenetic relationship in the end trees should be clear and make sense. For each tree, I need notes about the tree production like removal of specific sequences, branches, alignments, trimming etc. so the data is reproducible. - here is a zip of sequen...that's alright. They just need to have the stop codons (aka. the full protein) - RAxML (Randomized Axelerated Maximum Likelihood) is a popular program for phylogenetic analysis of large datasets under maximum likelihood. Its major strength is a fast maximum likelihood tree search algorithm that returns trees with good likelihood scores. - I use Linux and biopython interchangeably Thank you.

I need help building 6 gene trees. I need 6 clean, clear, phylogenetic trees built for all 6 genes. The phylogenetic relationship in the end trees should be clear and make sense. For each tree, I need notes about the tree production like removal of specific sequences, branches, alignments, trimming etc. so the data is reproducible. - here is a zip of sequence...that's alright. They just need to have the stop codons (aka. the full protein) - RAxML (Randomized Axelerated Maximum Likelihood) is a popular program for phylogenetic analysis of large datasets under maximum likelihood. Its major strength is a fast maximum likelihood tree search algorithm that returns trees with good likelihood scores. - I use Linux and biopython interchangeably Thank you.

My max budget is $50 and should be completed in 2 days. All required files are attached. I will provide 2 .gbf and 2 .gff files for reference. ,,,example2.gff. I have written a python script with input file , I got output of (its not complete correct, this output should be exactly match with ) Task is to create a new python script or modify file to generate correct output. Task should take multiple .gbf files as input and generate corresponding .gff files.

This is an example XML file I am seeking someone who can write a pack which takes as its input the id and then returns to coda each of the XML fields shown on the page

...manière rapide et efficace - Accompagner les clients dans le processus de réservation avant et après l’animation et s’assurer de leur entière satisfaction avec un excellent service à la clientèle - Gestion des commandes et communications des détails de l'événement et logistiques - Récupération et classement des informations des animations - Gestion des groupes de clavardage des équipes d'animation - Entrez les factures dans Quickbooks Détails : - Temps-partiel (10-15 heures par semaine). Besoin peut s’élever à plus que 15 heures dépendant du temps de l’année. - Horaire flexible - Disponibilité 5 jours semaine, quelques he...

...two JSON objects that are pulled from a URL's and want a separate JSON object built using efficient VB.net code that includes only the some of elements : ,28324054,23843509 Output will include linked by pmid to uid pmid year is_research_article relative_citation_ratio nih_percentile is_clinical citation_count ,28324054,23843509 Output will include linked by uid to pmid uid pubdate epubdate source authors in a concatuaded string in order ie "Hutchins BI, Klenke U, Wray S" volume issue pages issn essn pubtype fulljourbalname sortpubdate Please don't low bid and have me talk for awhile and then say you need more money. Bid what you feel it's worth

...elements of Abstract into one variable loop all elements in MeshHeadingList MeshHeading and make into a comma separated string ie: "Antineoplastic , adverse effects, therapeutic use, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma" loop all elements in KeywordList Keyword and make into a comma separated string ie: "L/D-amino acid, RNAi, cancer, chirality" from ,33022057,33868789&retmode=xml Multiple documents are all pulled at the same time. I need the code to loop each xml document and write the 5 variables; PMID, ArticleTitle, Abstract, MeshHeadingList and KeywordList. These variables will be sent to another function for additional processing. (I will handle that). A at this point is fine.

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I have an api ,26317679,26360820,26600305,26663085 that returns an JSON object that needs to be called and then formatted for an HTML page using pure JavaScript. The attached file shows what is needed step by step.

Fonction qui multiplie deux matrices MatrixMatrixMult. Entrez deux fichiers de formulaire : Matrice A et matrice B, Sortie pour classer les dimensions et les éléments de la matrice C=A*B. Les flux C++ doivent être utilisés pour afficher/lire/écrire des données de matrice.

I have an XML document that is returned from a url I have code that will read the data. It's on the attached file. I need to extract 3 elements-- The PMID, Article Title and Abstract Text -- look at the attached file and it will show my current function. It's close but it does not read all of the Abstract Text elements. This code has to be FAST. I want you to tell me how you want to do it before I select someone. It should only be a couple of lines of code. If not please explain to me why not. Please bid honestly and do not low ball me to get me to chat. I only need the code fixed and not an entire project

If you a python expert, and if you have experience in biology please contact me. Otherwise, don't waist my time.

I have a url that produces XML ,20962256,20952585,20400698,20122316,29504277 and I want the following elements for each node. PMID Join all authors in a single string with LastName Initials and comma. I need the node values Title ISOAbbreviation PubDate Year PubDate Month JournalIssue Volume JournalIssue Issue Pages <Pagination><MedlinePgn>1089-98</MedlinePgn> and the values for each ID in the ArticleList <ArticleIdList> <ArticleId IdType="pubmed">21563297</ArticleId> <ArticleId IdType="doi">10.1002/lt.22333</ArticleId> <ArticleId IdType="pmc">PMC3960597</ArticleId> <ArticleId IdType="mid">NIHMS295126</ArticleId> </ArticleIdList> The javascript code will go into a...

I need some vb.net code that will read an XML document using XMLReader and parse out the following elements from the link at the bottom: PMID AuthorList LastName ForeName Initials Suffix Identifier Combine all Affiliations from ,33022057,33868789,33749724&retmode=xml

Dears, I need assistance regarding Bioconductor and Biopython. Only serious bidders welcome.

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If you are expert in python, biopython, ubuntu, then tip. Otherwise, please don't waist my time.

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I have a url that produces an XML file with multiple PubMed Documents ,31427286,31390573,31315645,31213464,31130414,31130363,31053804,30990748,30742951,30456390,30018330,29967292,29437554 I need the Author section created into a JSON object using JavaScript such as : {'authors':[{'LastName': '', 'ForeName':'','Initials:'','ORCID_Identifier':'', 'email':'', 'affiliations':'Separate multiple affiliations with a double pipe ||'}] I've included some of my old code in the file uploaded

Needed a Biopython and python experts.

I have an XML document at and I need to read the <PubMedPubDate PubStatus="pubmed"> <Year>2019</Year> <Month>10</Month> <Day>15</Day> <Hour>6</Hour> <Minute>0</Minute> </PubMedPubDate> data I currently have what is in the file that is up loaded. I need to change what is listed for the PubDate node data with the PubMedPubDate PubStatus="pubmed" data

need an expert in biopython and python.

I have a javascrpt function that calls an API that returns a error message of Access to XMLHttpRequest at '' from origin '' has been blocked by CORS policy: No 'Access-Control-Allow-Origin' header is present on the requested resource. My javascript function is attached. What I would like to do is to have a VB.Net function in an ASMX page that returns the same json format data. So the call would go to my asmx page and it would go the the API server and return the json. So it would act as a proxy. OR fix my $.getJSON() call so it does not throw an error

Can be discussed through DM. Having some confidential details.

...données de 1600 produits dans un catalogue. Exemple : 1. Le format d'écriture d'un produit est : TYPE DE PRODUIT - NOM et/ou MARQUE QUANTITÉ (ex. Steak Haché - Le Boeuf Charal 2 x 250g) 2. Lorsque la case "Name" est déjà renseignée, corrigez le format d'écriture. 3. Si l'information NOM, MARQUE ou QUANTITÉ n'est pas disponible, ne les entrez pas. La rémunération est de 0.06€ / produit bien rentré. Nous vérifierons le travail, et nous ne pouvons pas rémunérer les produits qui ne seront pas entrés selon le format précisé ci-dessous, ou les produits dont les informations seraient manquantes (par exemple, vous n...

I need a vb.net function that I can put into a vb.net web api that calls the following url ,28052820,28052818,26992086,26747709,26503472,26490556,26242312,26025666 I need code that will read the json and filter either with a JSONPath object or LINQ. I need a filter that will return a comma separated sting of the UID values from objects that have been published since 1/1/2018 or whatever date that the end user decides but you can use 1/1/2018 for this code in the "sortpubdate" field Return value 30368741,28052820,28052818,26992086,26747709, etc

...for a sentence in French. It tries to translate the sentence in English. It looks in CSV files for words that are in the user sentence. For words that have only one sense, it gives the output for those words. But if a word has 2 or more senses: - it looks at surrounding words - it asks the user which sense he/she wants. Then, it outputs the right translation for that sentence. Example1: (prompt) Entrez une phrase: (moi) Je vois le garçon au restaurant. (prompt) Est-ce sens propre ou figuratif? (me) propre (prompt) I see the waiter at the restaurant. (Note: here, the system knows that it is the 'waiter' sense because it relates 2 words. 'waiter' and 'restaurant' for 'garçon' sense) Example2: (moi) Je vois le garçon. (...

..."[FAU]"; let AU = [index]["Last_Name"]+ ' ' + [index]["First_Name"].slice(0, 1) + [index]["MI"].slice(0, 1) + "[AU]" ; let authorNames = "("+ FAU + " OR " + AU + ") " let LastName = [index]["Last_Name"].toLowerCase() let linkGetIdList = ''; linkGetIdList += '&db=pubmed&'; linkGetIdList += 'term=' + authorNames +' AND ' + affiliation[0] + '[AD]'; (linkGetIdList).then((res) => { let idlist = let passID = (',') [index]["ORCID"] = "XXXX"

...a function If the a person types in the input "Medical University of South Carolina" the search string will look like: (SEARCH URL) ((SEARCH_TERM[Affiliation]) AND orcid[auid]) Which will look like: (SEARCH URL) ((medical university of South Carolina[Affiliation]) AND orcid[auid]) I need the idlist of values that is returned combined and sent to another API system that will return an XML object. (FETCH URL)(,32033032,32032440,32025343,32024424,32023372,32022559) From that XML object I need the information that is in the

Looking forward to someone who has some experience with Python and Biopython. I have a finished website with a python backend. Translate the code from screenshots into the correct file so the website works with python. Some css components might be missing, they are all available online. This should not take that long to complete. Requires Python 2.7 and Biopython. Thank you.

I need a proc that will parse the following api file and insert it into a Table ,19505939,217873815946,30166592,30310060,30575739,30837262 I've attached my vb.net function that parses the file and sends it to the proc. What I want now is for the proc to parse the entire JSON file that it reads from the url. I can pass the entire JSON and the proc needs to read each element and loop each record to do an insert

i want complete web application with script in java or python by using biojava or biopython in which biological formats convert into other option file upload and copy paste in input time and output time download option and output too.. complete script and all files include script must include different functions for all formats links i want this formats.. Input formats and Available output formats are listed below. Fasta :converted into pir,phylip,genbank,seqxml. Fastq: converted into fasta, pir, genbank, phylip, qual. PIR :converted into fasta, phylip, genbank, seqxml. Phylip: converted into fasta, genbank, pir. PDB: converted into fasta,pir,phylip and genbank GenBank: converted into fasta, phylip, pir, seqxml. Seqxml

I need to have the JSON object that is returned by ,29380678,29248818,29211900,29188593,29130025 converted into a new JSON object. The new object will only have three items, UID, Year, Data. The UID will be the UID of the article, the year is the first 4 characters of the pubdate and the data will be build with the title, all the authors, the source and the PMCID or PMC ID Barriers, facilitators, and potential strategies for increasing HPV vaccination: A statewide assessment to inform action. (note: Title is a hyperlink see ) Cartmell KB, Young-Pierce J, McGue S, Alberg AJ, Luque JS, Zubizarreta M, Brandt HM. nt J Gynecol Pathol.

Neural network for bioinformatics in python (biopython, sklearn) I need urgent help with a neural network programming project in python for bioinformatics. Everything is outlined in the attached files. I attached some resources for learning the bioinformatics background for the problem. There are two parts. Part A has specific instructions and must be completed in 4 days from now maximum, I'm willing to pay 80$ for it. If you can ONLY do part A let me know, I may still interested. Part B is open-ended. If doing both parts A and B, they must be done in 6 days maximum from now, I'm willing to pay 180$ total. Results of part A still have to be provided in 4 days.

I need someone to read the returned json file with javascript in a vue.js app ,19505939,21787381,23475625,24743992. I want to pass a variable and only read the file that are published equal to or after that year. I want the uid identifier created into a comma seperated string. The entire AXIOS procedure is attached in the file. If the year passed in is 201 then the string should be 21787381,23475625,24743992. I will pass that to a database- you do not need to worry about that. No- jQuery

I need to put the attached JSON file into the following format , (a=>)).join(',')} so I can use it in a VUE project . For the right person a simple 10 minute job. For a newbie like me forever. I'm getting this back from an API call axios({ method: "GET", url: " }) .then(res => { var obj = ; delete ; ("1"); (obj); = obj; ("2"); (); ("3"); ("next"); (());

I need a very simple table built using the information that comes back using AXIOS from a government API. The url is "" I have a small codepen file I'm mostly interested in being able to create the Articles object from the AXIOS connection I will pull this code out and put it in a bigger project.

I need a very simple table built using the information that comes back using AXIOS from a government API. The url is ",27573913,26327632" The table information is included in the file uploaded

I need à short leflet for a street advertise campaign ! To put it on a scooter ! Juste Quick and Simple picture sentence promotion :) Thanks Basicaly i want this Guy on an escooter TIER ! Use Those sentences translation below: l’application TIER 2.Entrez le code : goodTIERINGLyon Un ride gratuit de 15 minutes + 1 € pour me débloquer. Application disponible sur IOS et Android. Seulement pour les nouveaux utilisateurs.

Given a set of DNA sequences, find a set of l-mers, one from each sequence, that maximizes the consensus score. Input: A t×n matrix of DNA, and l , the length of the pattern to find. Output: An array of t starting positions s = (s1 , s2 , . . . , st ) maximizing Score(s, DNA). There is also other tasks in the pdf attached. I need help to sort this out as I don't understand much about biology and my python level is very low/

See the attached file and I need some Javascript code that will put the idList values into a comma separated string. Nothing fancy just some good code. The text is created from a javascript function. No PHP function readPMIDList() { $.getJSON("", function (data) { }); }

I have a url (,18321653,25224609,20004523) that returns a JSON object that is comprised of various elements. I send it the ID's using JavaScript of publications and it returns an object with all of the data for all of the id's but in a random order. I need an efficient way that the publication will be rendered in the same order as the comma separated string. Test your solution by putting the numbers in a different order. Please NO PHP solutions. Only JavaScript or jQuery

I want a big Case saying ENTREZ VOTRE CODE POSTAL (enter your zip code) directly on the home page. Once customers enter their zip code, they are automatically redirect to the root category related to his zip code. That feature will be the only thing on the home page. Right now i have 2 root category i want to be able to change those parameters later on. For example, i will want to add/remove zip code from a category, adding a new root category with new zip codes, etc....

I need a software/application which can take genomic data as input and can produce some valuable stats (example: certain disease, SNP's etc). I need to use google genomic cloud or aws genomic cloud. Let me know if you can help me. I just want a very basic and simple app.

I have a url that I need to read into separate elements so I can save it into a database. The url is ,25728766,22464731,19713527,20383141,21594579,19270694 and I need to same each item separately .

I have a url that I need to read into separate elements so I can save it into a database. The url is ,25728766,22464731,19713527,20383141,21594579,19270694 and I need to same each item separately .

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Tweak a little code - I need to request the XML from PubMed like ,28322247,26158412&retmode=xml The example has 3 IDs but the request can be as much as 200 at a time. The request is being done by a VB.NET web service. I am looking for the most efficient way to process the XML files. I know that the the term "best" or "efficient" is very subjective and dependent upon many things but I'm not sure if it is better to send the entire string to the SQL Server database (if it is even possible because of length or possible nesting levels) and let it parse the document and save it to the database or is it better to parse the document in the web service using a XMLTextReader or XML Document Object and send each document